STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NMD3_GASACGlutaredoxin 5 homolog (S. cerevisiae). (157 aa)    
Predicted Functional Partners:
G3PIL0_GASAC
BolA family member 1; Belongs to the BolA/IbaG family.
   
 
 0.911
G3NLP5_GASAC
Iron-sulfur cluster assembly 1.
   
 0.849
G3NY08_GASAC
Iron-sulfur cluster assembly 2.
    
 0.846
G3P3G3_GASAC
MET proto-oncogene, receptor tyrosine kinase.
    
 0.799
G3P8P8_GASAC
Macrophage stimulating 1 receptor a.
    
 0.799
G3PE85_GASAC
Macrophage stimulating 1 receptor b.
    
 0.799
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.733
G3PLT3_GASAC
Si:ch211-207k7.4.
    
 0.724
G3NMM5_GASAC
SERPIN domain-containing protein; Belongs to the serpin family.
   
 0.709
G3Q2L4_GASAC
ATP-binding cassette, sub-family B (MDR/TAP), member 7.
    
 
 0.677
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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