STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NME6_GASACNanos-type domain-containing protein; Belongs to the nanos family. (110 aa)    
Predicted Functional Partners:
G3NDN1_GASAC
CCR4-NOT transcription complex, subunit 1.
    
 
 0.922
G3NQE2_GASAC
Pumilio RNA-binding family member 1.
   
 
 0.882
G3P589_GASAC
Pumilio RNA-binding family member 2.
   
 
 0.882
G3NU11_GASAC
Ectodysplasin A receptor.
    
 0.829
G3PHA6_GASAC
Piwi-like RNA-mediated gene silencing 2.
   
 
 0.647
G3PF03_GASAC
Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family.
   
 
 0.633
PDZRN4
PDZ domain containing ring finger 4.
    
 0.595
G3NK41_GASAC
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.595
G3NNR0_GASAC
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.595
G3NQR2_GASAC
TNF receptor-associated factor 7.
    
 0.595
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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