STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NMG0_GASACNuclear receptor subfamily 1, group H, member 5. (460 aa)    
Predicted Functional Partners:
G3PFG0_GASAC
Nuclear receptor corepressor 2.
    
 0.910
G3QA56_GASAC
Uncharacterized protein.
    
 0.910
G3PCY5_GASAC
Uncharacterized protein.
   
0.901
RXRB
Retinoid X receptor beta.
   
0.899
G3NZ05_GASAC
Retinoid x receptor, beta b.
   
0.899
G3Q2E4_GASAC
Retinoid X receptor, alpha a.
   
0.899
G3Q7H8_GASAC
Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha.
    
 0.899
G3NRM9_GASAC
Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
 0.897
G3NZ06_GASAC
Nuclear receptor subfamily 1, group D, member 2b.
   
0.870
G3PHQ2_GASAC
Nuclear receptor subfamily 1, group D, member 2a.
   
0.870
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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