STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NML0_GASACSi:ch211-195e19.1. (224 aa)    
Predicted Functional Partners:
G3NXU6_GASAC
N(alpha)-acetyltransferase 35, NatC auxiliary subunit.
   
 0.946
G3PA33_GASAC
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.865
G3NPL0_GASAC
Si:ch211-81n22.1.
  
  
 
0.853
G3PAW5_GASAC
N-acetyltransferase domain-containing protein.
  
  
 
0.851
G3Q3B6_GASAC
N-acetyltransferase domain-containing protein.
     
0.803
G3NG36_GASAC
Small nuclear ribonucleoprotein-associated protein.
    
 0.763
G3Q6G8_GASAC
N(alpha)-acetyltransferase 38, NatC auxiliary subunit.
    
 0.763
G3PTN9_GASAC
Aspartate aminotransferase.
     
 0.634
G3N497_GASAC
Asparagine synthetase [glutamine-hydrolyzing].
     
 0.629
ASS1
Argininosuccinate synthase 1.
   
 
  0.623
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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