Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
G3NML5_GASACCalpain 1, (mu/I) large subunit a; Belongs to the peptidase C2 family. (712 aa)    
Predicted Functional Partners:
G3PMZ5_GASAC
Zgc:153993.
   
 0.903
G3PM69_GASAC
BCL2 associated X, apoptosis regulator a.
    
 0.902
G3P2I2_GASAC
Uncharacterized protein.
   
 0.884
CAPNS1
Calpain small subunit 1.
   
 0.787
G3Q9T3_GASAC
Uncharacterized protein.
   
 0.787
G3NCD9_GASAC
Programmed cell death 6.
    
 0.533
G3NWY0_GASAC
Penta-EF-hand domain containing 1.
    
 0.533
GCA
Grancalcin.
    
  0.531
G3Q0S2_GASAC
Uncharacterized protein.
    
  0.531
G3Q845_GASAC
Guanylate kinase-like domain-containing protein.
   
 
 0.465
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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