STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NMN3_GASACSMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family. (3641 aa)    
Predicted Functional Partners:
G3NA05_GASAC
SMG7 nonsense mediated mRNA decay factor.
   
 0.993
UPF1
UPF1 RNA helicase and ATPase.
    
 0.991
G3PS70_GASAC
Uncharacterized protein.
    
 0.991
G3NXC9_GASAC
SMG9 nonsense mediated mRNA decay factor.
    
 0.989
G3QCH8_GASAC
SMG8 nonsense mediated mRNA decay factor.
   
 0.989
G3Q2F0_GASAC
Regulatory associated protein of MTOR, complex 1.
   
 0.987
G3P3H8_GASAC
MTOR associated protein, LST8 homolog (S. cerevisiae).
    
 0.986
UPF2
UPF2 regulator of nonsense mediated mRNA decay.
   
 
 0.984
G3PDI0_GASAC
RPTOR independent companion of MTOR, complex 2 a.
   
 0.983
G3Q1D7_GASAC
Eukaryotic translation termination factor 1b.
   
 
 0.982
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.