Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
G3NMN3_GASACSMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family. (3641 aa)    
Predicted Functional Partners:
G3NXC9_GASAC
SMG9 nonsense mediated mRNA decay factor.
    
 0.999
G3QCH8_GASAC
SMG8 nonsense mediated mRNA decay factor.
   
 0.999
G3NA05_GASAC
SMG7 nonsense mediated mRNA decay factor.
   
 0.998
UPF2
UPF2 regulator of nonsense mediated mRNA decay.
   
 
 0.997
UPF1
UPF1 RNA helicase and ATPase.
    
 0.996
G3PS70_GASAC
Uncharacterized protein.
    
 0.996
G3Q1D7_GASAC
Eukaryotic translation termination factor 1b.
    
 
 0.991
G3Q963_GASAC
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
 
 0.991
G3NSE6_GASAC
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]
    
 0.988
G3PII4_GASAC
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
    
 
 0.988
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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