STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NMR9_GASACOTU deubiquitinase 3. (387 aa)    
Predicted Functional Partners:
G3P023_GASAC
FA complementation group E.
   
 
 0.964
G3NQH0_GASAC
Mitochondrial ribosomal protein L32.
  
 
 0.959
G3N840_GASAC
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.954
G3N5P1_GASAC
Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.952
G3NBT2_GASAC
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.952
G3PM62_GASAC
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 
 0.951
G3PJC8_GASAC
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.950
G3P5V0_GASAC
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
    
 
 0.949
G3NA94_GASAC
Mitochondrial ribosomal protein S16.
  
 
 0.932
G3NFX5_GASAC
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.931
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.