STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NMS5_GASACTransmembrane protein 240a. (175 aa)    
Predicted Functional Partners:
G3NYA8_GASAC
Cleavage and polyadenylation specific factor 4.
   
 0.979
G3P0K7_GASAC
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.979
G3P1Y1_GASAC
Cleavage and polyadenylation specific factor 1.
    
 0.978
WDR33
WD repeat domain 33.
    
 0.977
G3PTV6_GASAC
FIP1 like 1b (S. cerevisiae).
    
 0.977
G3Q6T9_GASAC
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.959
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.950
G3N8L8_GASAC
WD repeat domain 82.
   
 0.947
G3N9A2_GASAC
Cleavage and polyadenylation specific factor 3.
   
 0.947
G3NA27_GASAC
WD_REPEATS_REGION domain-containing protein.
   
 0.947
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.