STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NMU7_GASACOTU domain containing 6B. (299 aa)    
Predicted Functional Partners:
G3N9I3_GASAC
Myb-like, SWIRM and MPN domains 1.
   
 
 0.645
G3PZ73_GASAC
Ubiquitin carboxyl-terminal hydrolase.
   
  
 0.614
G3NX84_GASAC
Thyroid hormone receptor interactor 12.
      
 0.596
G3NLB6_GASAC
YOD1 deubiquitinase.
      
 0.593
G3PT97_GASAC
Ubiquitin carboxyl-terminal hydrolase.
   
  
 0.531
G3PMQ5_GASAC
Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family.
   
  
 0.521
G3P544_GASAC
Anion exchange protein.
   
 
  0.513
G3PQC3_GASAC
Ubiquitin specific peptidase 8; Belongs to the peptidase C19 family.
   
  
 0.512
G3NEQ2_GASAC
COP9 signalosome subunit 5.
   
  
 0.510
G3Q9R2_GASAC
Ubiquitin specific peptidase 25; Belongs to the peptidase C19 family.
   
  
 0.506
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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