STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAD6Mothers against decapentaplegic homolog. (491 aa)    
Predicted Functional Partners:
G3PEN8_GASAC
Yes-associated protein 1.
    
 0.933
G3NVD5_GASAC
E3 ubiquitin-protein ligase.
    
 0.902
SMURF1
E3 ubiquitin-protein ligase.
    
 0.902
SMURF2
E3 ubiquitin-protein ligase.
    
 0.902
G3PYR3_GASAC
Mothers against decapentaplegic homolog.
   
0.896
G3Q4E5_GASAC
Mothers against decapentaplegic homolog.
   
0.896
G3QBB9_GASAC
Mothers against decapentaplegic homolog.
   
0.896
G3PW12_GASAC
Mothers against decapentaplegic homolog.
  
 
0.852
G3PTH4_GASAC
E3 ubiquitin-protein ligase.
   
 0.832
G3PVV5_GASAC
NEDD4 like E3 ubiquitin protein ligase.
    
 0.832
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.