Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NN17_GASACTroponin I type 1b (skeletal, slow). (183 aa)    
Predicted Functional Partners:
G3PHV3_GASAC
Troponin C type 1b (slow).
   
 0.976
TNNC1
Troponin C type 1a (slow).
   
 0.976
G3NJK8_GASAC
Si:rp71-17i16.4.
   
 0.945
G3NJM6_GASAC
Troponin C type 2 (fast).
   
 0.945
G3NN46_GASAC
Troponin T type 2b (cardiac).
  
 0.944
G3P0M2_GASAC
Troponin T type 3a (skeletal, fast).
  
 0.944
G3NJL9_GASAC
Uncharacterized protein.
  
 0.943
G3Q9A1_GASAC
Troponin T2c, cardiac.
  
 0.942
G3PZ83_GASAC
Uncharacterized protein.
  
 0.941
G3P5I8_GASAC
Troponin T type 2a (cardiac).
  
 0.940
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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