STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NN20_GASACMethyltransferase like 11B. (292 aa)    
Predicted Functional Partners:
G3NB93_GASAC
Acetylserotonin O-methyltransferase-like.
     
 0.679
G3NQM5_GASAC
Monoglyceride lipase.
     
 0.679
G3P697_GASAC
Aldehyde dehydrogenase 7 family, member A1; Belongs to the aldehyde dehydrogenase family.
   
 
 0.670
G3PKV2_GASAC
NAD(P)-bd_dom domain-containing protein.
   
 0.669
G3PY18_GASAC
Ribosomal protein S17.
   
 0.669
G3NUJ5_GASAC
Si:dkey-10o6.2; Belongs to the iron/ascorbate-dependent oxidoreductase family.
     
 0.667
G3NK58_GASAC
Mitochondrial ribosomal protein L15.
   
 
  0.660
G3NA42_GASAC
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
    0.644
G3PNZ1_GASAC
Peroxiredoxin 6.
   
 
  0.626
PRDX6
Peroxiredoxin 6.
   
 
  0.626
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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