Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NN25_GASACGolgin, rab6-interacting. (276 aa)    
Predicted Functional Partners:
G3PJ12_GASAC
Ring finger and CHY zinc finger domain containing 1.
    
 
 0.958
G3PCQ3_GASAC
SCY1-like, kinase-like 3.
   
 
 0.773
SCYL1
SCY1 like pseudokinase 1.
   
 
 0.773
G3P894_GASAC
Si:dkey-24l11.2.
    
 
 0.748
G3PRU6_GASAC
Formimidoyltransferase cyclodeaminase.
      
 0.654
G3PQ11_GASAC
Aspartyl-tRNA synthetase 2, mitochondrial.
      
 0.639
G3NN48_GASAC
Paired related homeobox 1a.
    
 
 0.595
G3PWV6_GASAC
HEAT repeat containing 3.
      
 0.552
G3NC37_GASAC
Ankyrin repeat and SOCS box containing 1.
      
 0.545
G3NFX5_GASAC
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
      
 0.544
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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