Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
G3NN50_GASACUnc-13 homolog D (C. elegans). (1065 aa)    
Predicted Functional Partners:
G3PL27_GASAC
Uncharacterized protein.
    
 
 0.647
G3PTJ3_GASAC
RAB27A, member RAS oncogene family.
    
 
 0.647
G3Q166_GASAC
RAB27B, member RAS oncogene family.
    
 
 0.647
G3NJS6_GASAC
Lysosomal trafficking regulator.
   
  
 0.592
G3NST1_GASAC
Eomesodermin homolog b.
      
 0.552
SLC22A17
Solute carrier family 22 member 17.
      
 0.539
G3NYX9_GASAC
Lymphocyte cytosolic protein 1 (L-plastin).
      
 0.539
SLC66A2
Solute carrier family 66 member 2.
      
 0.539
G3PQ75_GASAC
Cytokine receptor-like factor 3.
      
 0.532
NDUFA13
NADH:ubiquinone oxidoreductase subunit A13.
     
 0.498
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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