Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NN58_GASACWD repeat domain 32. (454 aa)    
Predicted Functional Partners:
G3PYM2_GASAC
Damage-specific DNA binding protein 1.
    
 0.972
G3PRL7_GASAC
Cullin 4A; Belongs to the cullin family.
    
 0.960
G3PQA7_GASAC
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.952
G3PED2_GASAC
Ddb1 and cul4 associated factor 5.
     
 0.949
G3PZG9_GASAC
Cullin 4B; Belongs to the cullin family.
    
 0.941
G3NVX2_GASAC
WD and tetratricopeptide repeats 1.
   
 
 0.921
G3PHX3_GASAC
WD repeat domain 21.
     
 0.907
G3PFF6_GASAC
Zgc:153240.
      
 0.880
G3NVV8_GASAC
Excision repair cross-complementation group 8.
     
 0.879
G3NNN2_GASAC
Damage-specific DNA binding protein 2.
   
 0.869
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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