Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NN85_GASACSRP40_C domain-containing protein. (379 aa)    
Predicted Functional Partners:
G3P227_GASAC
NOP56 ribonucleoprotein homolog.
   
 
 0.998
G3NJV1_GASAC
Fibrillarin.
   
 
 0.993
G3PKR4_GASAC
NOP58 ribonucleoprotein homolog (yeast).
   
 
 0.993
G3NKC3_GASAC
Dyskeratosis congenita 1, dyskerin.
   
 
 0.991
G3Q4N9_GASAC
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.973
G3PDL1_GASAC
CCAAT enhancer binding protein zeta.
   
   0.966
G3PRQ2_GASAC
TruB pseudouridine (psi) synthase family member 1.
   
 
 0.960
G3NKP9_GASAC
Ribosomal L1 domain containing 1.
   
 
 0.955
G3PHC0_GASAC
WD repeat domain 43.
   
 
 0.951
DHX15
DEAH-box helicase 15.
   
   0.940
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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