Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NN88_GASACTripartite motif containing 65. (493 aa)    
Predicted Functional Partners:
G3PBS5_GASAC
Tripartite motif containing 44.
    
 
 0.715
G3PT30_GASAC
Tripartite motif containing 23.
    
 0.656
G3P2M0_GASAC
Uncharacterized protein.
    
 0.636
G3NPR2_GASAC
Interferon induced with helicase C domain 1.
   
 0.605
G3PWE1_GASAC
Tripartite motif containing 32.
    
 0.527
G3PCG6_GASAC
Ribosomal protein S27a.
    
  0.525
DDX41
DEAD-box helicase 41.
    
  0.513
G3NCA0_GASAC
Uncharacterized protein.
    
  0.496
G3PNC3_GASAC
Growth arrest-specific 7a.
    
  0.496
UBE2N
Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.488
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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