STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NN92_GASACTUB like protein 1b; Belongs to the TUB family. (294 aa)    
Predicted Functional Partners:
G3NPC7_GASAC
Tetratricopeptide repeat domain 21B.
    
 0.845
G3NF16_GASAC
Uncharacterized protein.
    
 0.836
G3PUL6_GASAC
WD repeat domain 19.
    
 0.834
G3P0L7_GASAC
Intraflagellar transport 140 homolog (Chlamydomonas).
    
 0.829
G3PHR0_GASAC
WD repeat-containing protein 35.
    
 0.822
G3N897_GASAC
Protein kinase, cAMP-dependent, regulatory, type II, alpha, B.
   
  0.744
G3PEK3_GASAC
Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family.
   
  0.705
G3NG53_GASAC
G protein-coupled receptor 161; Belongs to the G-protein coupled receptor 1 family.
     
 0.701
G3NUS9_GASAC
Neuropeptide Y.
   
 
  0.627
G3P2H4_GASAC
Dopamine receptor D4a; Belongs to the G-protein coupled receptor 1 family.
   
 
  0.597
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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