STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NNA5_GASACIQ motif containing H. (1003 aa)    
Predicted Functional Partners:
G3P8K9_GASAC
Mitochondrial ribosomal protein L12.
   
 0.713
G3PJK8_GASAC
TraB domain containing.
    
   0.568
G3NZ76_GASAC
Fem-1 homolog b (C. elegans).
    
 
 0.563
G3PU07_GASAC
SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.
   
 
 0.512
G3Q252_GASAC
Uncharacterized protein.
   
   0.507
G3P5V7_GASAC
Uncharacterized protein.
   
 
 0.506
G3N700_GASAC
Plug_translocon domain-containing protein.
    
 
 0.501
G3P5M5_GASAC
Plug_translocon domain-containing protein.
    
 
 0.501
G3P0C3_GASAC
NADH:ubiquinone oxidoreductase core subunit S7; Belongs to the complex I 20 kDa subunit family.
   
 
 0.495
NEK9
NIMA related kinase 9.
    
 
 0.480
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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