STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NNB1_GASACUbiquitin associated and SH3 domain containing Bb. (648 aa)    
Predicted Functional Partners:
G3PEY0_GASAC
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
  
 
 0.880
G3PHJ7_GASAC
Myo-inositol oxygenase.
  
 
 0.742
G3QA27_GASAC
Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family.
    
  0.722
G3NM12_GASAC
Phosphoserine aminotransferase.
    
 0.720
G3NY86_GASAC
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.717
G3PQ59_GASAC
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.717
G3PU25_GASAC
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
    
 0.716
G3NT37_GASAC
Serine hydroxymethyltransferase 2 (mitochondrial).
    
 0.713
G3NYA3_GASAC
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.713
G3PYR1_GASAC
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
 
 0.706
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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