Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
G3NNB4_GASACUbiquitin protein ligase E3D. (382 aa)    
Predicted Functional Partners:
G3PX13_GASAC
DWNN domain-containing protein.
    
 0.940
G3PX16_GASAC
Uncharacterized protein.
    
 0.940
G3N9A2_GASAC
Cleavage and polyadenylation specific factor 3.
    
 
 0.924
G3NG68_GASAC
Ubiquitin-conjugating enzyme E2C; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.924
CPSF3
Cleavage and polyadenylation specific factor 3.
    
 
 0.924
G3NKN6_GASAC
Mediator of cell motility 1.
    
   0.895
G3PM80_GASAC
Cytochrome b5 reductase 4.
      
 0.684
G3P0K7_GASAC
Cleavage and polyadenylation specificity factor subunit 2.
    
 
 0.665
G3NX84_GASAC
Thyroid hormone receptor interactor 12.
     
  0.649
G3PR15_GASAC
Pseudouridine 5'-phosphatase.
      
 0.630
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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