Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
G3NNB6_GASACSUZ RNA binding domain containing 1. (159 aa)    
Predicted Functional Partners:
G3N824_GASAC
Serine/threonine kinase receptor associated protein.
    
   0.960
G3NWY3_GASAC
Small integral membrane protein 12.
   
   0.752
G3PTW8_GASAC
Methenyltetrahydrofolate synthetase domain containing.
   
    0.749
G3NKA3_GASAC
UTP15 small subunit processome component.
   
    0.735
G3P4V7_GASAC
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
    0.711
G3P3M1_GASAC
26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family.
   
    0.703
G3P3P1_GASAC
Uncharacterized protein.
   
    0.703
G3PTP0_GASAC
NSA2 ribosome biogenesis homolog (S. cerevisiae).
      
 0.702
G3P227_GASAC
NOP56 ribonucleoprotein homolog.
   
    0.688
G3P2C0_GASAC
Structural maintenance of chromosomes protein.
   
    0.688
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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