STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NNF3_GASACADNP homeobox 2b. (870 aa)    
Predicted Functional Partners:
G3N8X5_GASAC
M-phase phosphoprotein 8.
    
 
 0.603
RRP36
Ribosomal RNA processing 36.
      
 0.527
CBX1
Chromobox homolog 1b (HP1 beta homolog Drosophila).
    
 
 0.519
CBX1-2
Uncharacterized protein.
    
 
 0.519
G3NVJ3_GASAC
Chromobox homolog 3a (HP1 gamma homolog, Drosophila).
    
 
 0.519
G3P4B2_GASAC
Chromobox homolog 5 (HP1 alpha homolog, Drosophila).
    
 
 0.519
G3ND21_GASAC
Chromodomain protein, Y-like.
   
 
 0.507
CDYL2
Chromodomain Y like 2.
   
 
 0.507
G3NW15_GASAC
Uncharacterized protein.
  
     0.492
G3NPY0_GASAC
Zinc finger protein 407.
   
 
 0.486
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.