STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP23BMatrix metallopeptidase 23B. (353 aa)    
Predicted Functional Partners:
G3NWR3_GASAC
Phospholipase A2.
     
 0.787
G3PAJ5_GASAC
TIMP metallopeptidase inhibitor 2b.
   
 0.730
G3NF90_GASAC
TIMP metallopeptidase inhibitor 2a.
   
 0.707
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.698
G3NWR5_GASAC
TIMP metallopeptidase inhibitor 4, tandem duplicate 2.
    
 0.693
COL22A1
Collagen type XXII alpha 1 chain.
    
 0.579
G3PBZ4_GASAC
Link domain-containing protein.
    
 0.563
G3NVG6_GASAC
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.552
G3Q321_GASAC
Heparin-binding EGF-like growth factor a.
    
  0.545
HGFAC
HGF activator.
   
 0.525
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.