Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMP23BMatrix metallopeptidase 23B. (353 aa)    
Predicted Functional Partners:
G3PAJ5_GASAC
TIMP metallopeptidase inhibitor 2b.
   
 0.699
G3NF90_GASAC
TIMP metallopeptidase inhibitor 2a.
   
 0.654
G3NWR5_GASAC
TIMP metallopeptidase inhibitor 4, tandem duplicate 2.
    
 0.626
G3NWQ5_GASAC
NOC2-like nucleolar associated transcriptional repressor.
      
 0.604
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.590
G3NA95_GASAC
Calpain 7; Belongs to the peptidase C2 family.
      
 0.551
G3NMM4_GASAC
Cyclin-dependent kinase 13.
      
 0.540
G3PLU2_GASAC
Hemopexin; Binds heme and transports it to the liver for breakdown and iron recovery, after which the free hemopexin returns to the circulation.
      
 0.537
G3PUC6_GASAC
SUV3-like helicase.
    
 
 0.537
G3PIY2_GASAC
Calpain 5a; Belongs to the peptidase C2 family.
      
 0.528
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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