STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NNG6_GASACBardet-Biedl syndrome 5 protein homolog; Required for ciliogenesis; Belongs to the BBS5 family. (342 aa)    
Predicted Functional Partners:
G3NXV8_GASAC
Tetratricopeptide repeat domain 8.
  
 0.977
G3P7I9_GASAC
Bardet-Biedl syndrome 1.
  
 0.976
G3PLE4_GASAC
Bardet-Biedl syndrome 2 protein homolog.
   
 0.968
G3PWM5_GASAC
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
   
 0.968
G3PXZ6_GASAC
Bardet-Biedl syndrome 4.
   
 0.930
G3NM06_GASAC
Leucine zipper transcription factor-like 1.
   
 0.891
G3NXT5_GASAC
Ring-box 1, E3 ubiquitin protein ligase.
   
 0.714
G3PV31_GASAC
Sequestosome 1.
    
 0.707
G3Q4V9_GASAC
Gamma-secretase activating protein.
    
 0.707
G3NNH8_GASAC
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.687
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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