Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NNH8_GASACMindbomb E3 ubiquitin protein ligase 2. (964 aa)    
Predicted Functional Partners:
G3PCG6_GASAC
Ribosomal protein S27a.
   
 0.946
G3PFJ2_GASAC
E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.
    
 0.942
G3PH76_GASAC
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.939
G3P449_GASAC
Uncharacterized protein.
   
 0.932
G3PV96_GASAC
Neuralized E3 ubiquitin protein ligase 1Aa.
   
 0.932
G3Q2W5_GASAC
Neuralized E3 ubiquitin protein ligase 1B.
   
 0.932
G3NY48_GASAC
Zinc finger, AN1-type domain 4.
   
 0.928
G3NU55_GASAC
Charged multivesicular body protein 2Bb.
    
 
 0.918
G3NQR2_GASAC
TNF receptor-associated factor 7.
    
 0.917
G3PS32_GASAC
IST1 factor associated with ESCRT-III.
    
 
 0.916
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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