STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NNH8_GASACMindbomb E3 ubiquitin protein ligase 2. (964 aa)    
Predicted Functional Partners:
G3PCG6_GASAC
Ribosomal protein S27a.
   
 0.997
G3NZ68_GASAC
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.995
G3PTL1_GASAC
Tnfrsf1a-associated via death domain.
    
  0.975
G3PH76_GASAC
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.954
G3NY48_GASAC
Zinc finger, AN1-type domain 4.
   
 0.949
G3NQR2_GASAC
TNF receptor-associated factor 7.
    
 0.945
G3N5B5_GASAC
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 0.942
G3N659_GASAC
TANK-binding kinase 1.
   
 0.942
G3NJC9_GASAC
Inhibitor of nuclear factor kappa B kinase subunit beta.
   
 0.942
G3NJL3_GASAC
Protein kinase domain-containing protein.
   
 0.942
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (16%) [HD]