STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NNI4_GASACCollagen, type XXVIII, alpha 2a. (1086 aa)    
Predicted Functional Partners:
G3PX45_GASAC
Protein disulfide-isomerase.
   
  0.755
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
  0.717
G3PKN8_GASAC
Tenascin N.
   
 0.700
G3PAJ6_GASAC
Prolyl 3-hydroxylase 1.
   
 
 0.690
G3P3J2_GASAC
Tonsoku-like, DNA repair protein.
   
  0.674
G3PDM6_GASAC
2-epi-5-epi-valiolone synthase.
   
 
 0.643
G3NK22_GASAC
Translocase of outer mitochondrial membrane 20.
   
 0.635
G3NIY0_GASAC
AT rich interactive domain 4A (RBP1-like).
    
 0.634
G3N9I3_GASAC
Myb-like, SWIRM and MPN domains 1.
    
 0.633
G3PE85_GASAC
Macrophage stimulating 1 receptor b.
   
 0.633
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.