Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
G3NNI4_GASACCollagen, type XXVIII, alpha 2a. (1086 aa)    
Predicted Functional Partners:
G3NIY0_GASAC
AT rich interactive domain 4A (RBP1-like).
    
 0.580
G3NK22_GASAC
Translocase of outer mitochondrial membrane 20.
    
 0.580
G3NW60_GASAC
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.572
G3N9I3_GASAC
Myb-like, SWIRM and MPN domains 1.
    
  0.569
G3P037_GASAC
Tripartite motif containing 45.
    
 0.538
G3PX45_GASAC
Protein disulfide-isomerase.
    
 0.538
G3Q2E0_GASAC
Protein disulfide-isomerase.
    
 0.538
G3P1B8_GASAC
Uncharacterized protein.
    
 0.528
G3Q845_GASAC
Guanylate kinase-like domain-containing protein.
    
 0.523
RANBP2
RAN binding protein 2.
    
 0.516
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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