STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NNK5_GASACzf-3CxxC domain-containing protein. (87 aa)    
Predicted Functional Partners:
G3Q8U0_GASAC
Ubiquitin specific peptidase 18; Belongs to the peptidase C19 family.
   
  
 0.761
G3PN34_GASAC
Ring finger protein 213b.
   
    0.706
G3NPR2_GASAC
Interferon induced with helicase C domain 1.
   
  
 0.616
G3PB07_GASAC
Ring finger protein 213a.
   
    0.608
G3P1S9_GASAC
DEXH (Asp-Glu-X-His) box polypeptide 58.
   
  
 0.606
G3P2W5_GASAC
Radical S-adenosyl methionine domain containing 2.
   
  
 0.591
G3P022_GASAC
HECT domain-containing protein.
   
  
 0.541
G3NYV6_GASAC
Interferon regulatory factor 3.
   
  
 0.534
G3P3E8_GASAC
Epithelial stromal interaction 1.
   
  
 0.517
G3PSI1_GASAC
Signal transducer and activator of transcription.
   
  
 0.512
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.