STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NNN5_GASACCalpain 3a, (p94); Belongs to the peptidase C2 family. (713 aa)    
Predicted Functional Partners:
G3P2I2_GASAC
Uncharacterized protein.
   
 0.852
CAPNS1
Calpain small subunit 1.
   
0.814
G3Q9T3_GASAC
Uncharacterized protein.
   
0.814
G3NCD9_GASAC
Programmed cell death 6.
   
0.683
G3NWY0_GASAC
Penta-EF-hand domain containing 1.
   
0.683
GCA
Grancalcin.
   
0.680
G3Q0S2_GASAC
Uncharacterized protein.
   
0.680
G3Q845_GASAC
Guanylate kinase-like domain-containing protein.
    
 
 0.630
G3P6H8_GASAC
Caspase a; Belongs to the peptidase C14A family.
   
 0.616
G3P931_GASAC
Talin 2b.
    
 0.592
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.