STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NNP8_GASACT-box transcription factor Tb. (438 aa)    
Predicted Functional Partners:
G3PZT5_GASAC
POU domain protein.
   
 0.776
GATA2
GATA binding protein 2.
   
 0.732
G3P503_GASAC
GATA binding protein 2a.
   
 0.732
G3NM49_GASAC
Notochord homeobox.
    
 0.712
G3P7X5_GASAC
Bone morphogenetic protein 4.
     
 0.712
G3P7J8_GASAC
GATA binding protein 4.
   
 0.675
G3NFP9_GASAC
Eomesodermin homolog a.
   
 
0.672
G3NQ54_GASAC
T-box brain transcription factor 1b.
   
 
0.672
G3Q1E5_GASAC
Snail family zinc finger 2.
    
 0.672
G3NST1_GASAC
Eomesodermin homolog b.
  
 
0.667
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.