STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NNQ4_GASACBeta-carotene oxygenase 2b. (525 aa)    
Predicted Functional Partners:
G3P7J4_GASAC
Farnesyl-diphosphate farnesyltransferase 1.
    
 0.678
G3NW18_GASAC
Myosin IXAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.655
G3P8I5_GASAC
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.655
G3PXX3_GASAC
Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.655
dhrs4
Uncharacterized protein.
     
 0.650
G3PXL4_GASAC
Myosin IXb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.648
G3PXC7_GASAC
LRAT domain-containing protein.
     
 0.647
G3PR09_GASAC
Patatin-like phospholipase domain containing 4.
     
 0.641
G3Q0Q2_GASAC
NADH:ubiquinone oxidoreductase complex assembly factor 6.
    
 0.597
G3NPQ1_GASAC
Patatin-like phospholipase domain containing 2.
     
 0.591
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.