STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NNT5_GASACATP-binding cassette, sub-family B (MDR/TAP), member 11a. (1276 aa)    
Predicted Functional Partners:
G3P3N9_GASAC
Acetyl-CoA carboxylase beta.
  
 0.802
G3QAB5_GASAC
Acetyl-CoA carboxylase alpha.
  
 0.802
G3Q700_GASAC
Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.
  
 0.751
G3NXT7_GASAC
Huntingtin interacting protein 1.
    
 0.748
G3NZW0_GASAC
Huntingtin interacting protein 1 related b.
    
 0.748
PSMD2
26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family.
   
  0.737
G3PPJ1_GASAC
Proteasome 26S subunit, non-ATPase 3.
   
 0.732
atg6
Uncharacterized protein.
    
 0.730
G3P5A8_GASAC
Ubiquinol-cytochrome c reductase core protein 1.
   
 0.725
G3Q733_GASAC
Peptidase (mitochondrial processing) beta; Belongs to the peptidase M16 family.
   
 0.725
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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