STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NNT8_GASACUncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (421 aa)    
Predicted Functional Partners:
G3NVJ1_GASAC
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
  
 0.920
G3PAM8_GASAC
Agmatine ureohydrolase (agmatinase); Belongs to the arginase family.
  
 
 0.913
G3NDH0_GASAC
Ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.906
G3P780_GASAC
Arginase.
  
 
 0.903
G3PFK8_GASAC
Arginase.
  
 
 0.902
G3PGI6_GASAC
Ornithine decarboxylase antizyme 1a.
    
 0.891
G3PX79_GASAC
Ornithine decarboxylase antizyme 1b.
    
 0.891
G3NW56_GASAC
Ornithine decarboxylase antizyme 2a.
    
 0.887
G3N7S7_GASAC
Amine oxidase.
   
 
 0.873
G3PGZ7_GASAC
Spermidine/spermine N1-acetyltransferase 1b.
    
 0.866
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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