STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NNX4_GASACImmunoglobulin mu DNA binding protein 2. (1011 aa)    
Predicted Functional Partners:
G3NEU4_GASAC
Negative elongation factor complex member E.
    
   0.699
G3Q5Y3_GASAC
Negative elongation factor complex member A.
   
   0.635
G3P6D7_GASAC
Terminal uridylyl transferase 1, U6 snRNA-specific.
   
    0.599
G3P140_GASAC
Tyrosine--tRNA ligase.
      
 0.592
G3N506_GASAC
Activator of basal transcription 1.
    
 
 0.561
NTHL1
Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family.
 
 
    0.540
G3NE39_GASAC
Ganglioside induced differentiation associated protein 1; Belongs to the GST superfamily.
      
 0.520
G3NGQ4_GASAC
Glycyl-tRNA synthetase.
      
 0.499
G3PN71_GASAC
G-rich RNA sequence binding factor 1.
    
   0.491
GTF3C1
General transcription factor IIIC subunit 1.
   
 
 0.480
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.