Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NP02_GASACZinc finger CCCH-type containing 6. (1091 aa)    
Predicted Functional Partners:
G3N8L8_GASAC
WD repeat domain 82.
   
 0.935
G3NA27_GASAC
WD_REPEATS_REGION domain-containing protein.
   
 0.935
G3P1Y1_GASAC
Cleavage and polyadenylation specific factor 1.
   
 0.927
G3PTK8_GASAC
Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]
    
 0.923
G3NE42_GASAC
Symplekin.
   
 0.922
G3P0K7_GASAC
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.920
G3PTV6_GASAC
FIP1 like 1b (S. cerevisiae).
    
 0.919
G3PU25_GASAC
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
    
 0.919
G3PB93_GASAC
Cleavage stimulation factor, 3' pre-RNA, subunit 1.
   
 0.918
G3PZ46_GASAC
Cleavage stimulation factor, 3' pre-RNA, subunit 2.
   
 0.915
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.