STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NR77_GASACRetinoid isomerohydrolase RPE65 b. (532 aa)    
Predicted Functional Partners:
G3PXC7_GASAC
LRAT domain-containing protein.
     
 0.867
G3NQY1_GASAC
Retinol dehydrogenase 5 (11-cis/9-cis); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.866
G3NE64_GASAC
Retinol dehydrogenase 10a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.854
G3NNR4_GASAC
Retinol dehydrogenase 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.853
G3PR09_GASAC
Patatin-like phospholipase domain containing 4.
     
 0.853
G3N7F4_GASAC
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.852
G3N8W4_GASAC
Retinol dehydrogenase 20; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.852
DGAT1
O-acyltransferase.
   
 
 0.846
G3P2L8_GASAC
O-acyltransferase.
   
 
 0.846
G3Q186_GASAC
Retinoid isomerohydrolase RPE65 a.
  
  
 
0.842
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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