STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NTE6_GASACRing finger protein 165b. (340 aa)    
Predicted Functional Partners:
G3NZ68_GASAC
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.918
G3QA52_GASAC
Ubiquitin B.
    
 0.857
G3PCG6_GASAC
Ribosomal protein S27a.
    
 0.790
G3NY48_GASAC
Zinc finger, AN1-type domain 4.
   
 0.748
G3NMX3_GASAC
Ubiquitin-conjugating enzyme E2D 3; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.747
UBE2D1
Ubiquitin-conjugating enzyme E2D 1a; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.747
G3PB01_GASAC
Ubiquitin-conjugating enzyme E2D 4 (putative); Belongs to the ubiquitin-conjugating enzyme family.
   
 0.747
G3PRV7_GASAC
Ubiquitin conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.747
G3PXE0_GASAC
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.747
G3Q482_GASAC
Ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family.
   
 0.747
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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