STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NTV8_GASACRNA binding motif protein 7. (255 aa)    
Predicted Functional Partners:
G3NZM9_GASAC
Zinc finger, CCHC domain containing 8.
    
 
 0.983
G3PV23_GASAC
Mtr4 exosome RNA helicase.
    
 0.977
G3QBC1_GASAC
Exosome component 8.
    
 
 0.905
G3Q5I4_GASAC
Splicing factor 3b, subunit 2.
    
 0.894
G3PVC5_GASAC
Exosome component 3.
    
 
 0.892
G3NFF9_GASAC
Exosome component 7.
    
 
 0.833
G3PX61_GASAC
Exosome component 2.
    
 
 0.799
G3N6Z3_GASAC
Splicing factor 1.
    
  0.773
G3PE26_GASAC
C1D nuclear receptor corepressor.
   
 
 0.762
G3NVI1_GASAC
Exosome component 10.
    
 
 0.758
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.