STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NV86_GASACTreslin_N domain-containing protein. (1830 aa)    
Predicted Functional Partners:
G3NJV1_GASAC
Fibrillarin.
   
 
 0.947
G3NLR4_GASAC
DNA topoisomerase II binding protein 1.
   
 
 0.928
G3PE39_GASAC
Transducin (beta)-like 3.
   
 
 0.904
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
  
 
 0.878
G3PS11_GASAC
WD repeat domain 36.
   
 
 0.875
G3N6G2_GASAC
Extra spindle pole bodies like 1, separase.
   
 
 0.864
G3PLU0_GASAC
UTP4 small subunit processome component.
   
 
 0.861
G3PQ19_GASAC
PWP2 small subunit processome component.
   
 
 0.861
G3NKA3_GASAC
UTP15 small subunit processome component.
   
 
 0.859
G3PXB0_GASAC
Nucleoporin 155.
   
 0.856
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.