STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NVA3_GASACDeleted in azoospermia-like. (234 aa)    
Predicted Functional Partners:
G3PH76_GASAC
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.842
G3Q7T5_GASAC
DND microRNA-mediated repression inhibitor 1.
   
 0.802
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.767
G3NSE6_GASAC
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]
    
 0.763
G3P253_GASAC
Splicing factor 3b, subunit 1.
   
 0.752
G3PRH4_GASAC
DEAD (Asp-Glu-Ala-Asp) box polypeptide 4.
   
 0.748
G3PZX4_GASAC
Small nuclear ribonucleoprotein Sm D3.
   
 0.746
G3Q5I4_GASAC
Splicing factor 3b, subunit 2.
   
 0.743
G3Q163_GASAC
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
 0.741
G3PA33_GASAC
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.738
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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