STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NVJ1_GASACSpermidine synthase; Belongs to the spermidine/spermine synthase family. (303 aa)    
Predicted Functional Partners:
G3P1E4_GASAC
Aminoadipate-semialdehyde synthase.
   
 0.988
G3PHV7_GASAC
Ornithine decarboxylase 1; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 0.958
G3PAM8_GASAC
Agmatine ureohydrolase (agmatinase); Belongs to the arginase family.
  
 
 0.945
G3NTR1_GASAC
S-adenosylmethionine decarboxylase proenzyme.
    
 0.941
MTAP
S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates.
  
 
 0.938
G3QBR3_GASAC
Spermine synthase.
  
  
0.934
G3PL40_GASAC
Nitrilase family, member 2.
 
 
 0.927
G3NDH0_GASAC
Ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.920
G3NNT8_GASAC
Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 0.920
SMOX
Spermine oxidase.
   
 
 0.919
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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