STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NVM1_GASACHomeobox domain-containing protein. (363 aa)    
Predicted Functional Partners:
G3PI69_GASAC
Pre-B-cell leukemia homeobox 2.
   
 0.661
G3P708_GASAC
Pre-B-cell leukemia transcription factor 4.
   
 0.649
G3Q4L4_GASAC
Homeobox domain-containing protein.
   
 0.641
G3NIP3_GASAC
Homeobox domain-containing protein.
    
 0.640
G3PE55_GASAC
Homeobox domain-containing protein.
    
 0.640
G3PJE8_GASAC
Pre-B-cell leukemia homeobox 1a.
    
 0.640
G3NQ10_GASAC
Homeobox domain-containing protein.
  
 
0.604
G3NIL4_GASAC
Homeobox B5b.
   
 
0.552
G3NVP5_GASAC
Homeobox A5a.
  
 
0.523
G3NVN0_GASAC
Homeobox A4a.
  
  
0.489
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.