STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NYI0_GASACPalmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (273 aa)    
Predicted Functional Partners:
G3P1T0_GASAC
Protection of telomeres 1 homolog.
    
 0.693
G3NDB9_GASAC
Uncharacterized protein.
    
 0.671
G3P0U2_GASAC
Golgin A7.
   
 0.662
GOLGA7
Golgin A7.
    
 0.658
G3NXT4_GASAC
Golgin A7 family member B.
    
 0.631
G3Q554_GASAC
Golgin A7 family, member Ba.
    
 0.631
G3PZG1_GASAC
Family with sequence similarity 163 member B, genome duplicate a.
   
  
 0.614
G3QBX6_GASAC
RAD50 homolog, double strand break repair protein.
    
 0.610
COQ3
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
     
 0.584
G3P3Z7_GASAC
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
  0.581
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.