STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NYS9_GASACTransporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (730 aa)    
Predicted Functional Partners:
G3P6G4_GASAC
Syntaxin 1A (brain); Belongs to the syntaxin family.
   
 0.628
G3PUD1_GASAC
Calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 2.
   
  0.619
G3PP93_GASAC
Syntaxin 1B; Belongs to the syntaxin family.
   
 0.596
G3NJ42_GASAC
Syntaxin 4; Belongs to the syntaxin family.
    
 0.586
G3PF90_GASAC
Syntaxin 2b; Belongs to the syntaxin family.
    
 0.586
G3PVN7_GASAC
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.586
G3Q0R1_GASAC
Syntaxin 3A; Belongs to the syntaxin family.
    
 0.586
G3N9W1_GASAC
Calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 1.
   
  0.562
G3QCM7_GASAC
Calcium/calmodulin-dependent protein kinase II alpha.
   
  0.554
G3P1F1_GASAC
Syntaxin 11b, tandem duplicate 2.
    
 0.535
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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