STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NZA7_GASACHIT domain-containing protein. (302 aa)    
Predicted Functional Partners:
G3NRS9_GASAC
Si:dkey-103j14.5.
 
   
  0.877
G3N497_GASAC
Asparagine synthetase [glutamine-hydrolyzing].
     
 0.867
G3NIV2_GASAC
Asparaginase like 1.
 
   
  0.859
G3PTN9_GASAC
Aspartate aminotransferase.
   
 0.853
G3NN89_GASAC
Glutamate decarboxylase 2.
     
 0.847
G3P4S6_GASAC
Cysteine sulfinic acid decarboxylase.
     
 0.847
G3NRS1_GASAC
Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase.
    
 0.846
G3PRU6_GASAC
Formimidoyltransferase cyclodeaminase.
     
 0.840
G3QA64_GASAC
Aspartoacylase.
   
 
  0.840
G3N432_GASAC
Amine oxidase.
   
 
  0.839
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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