STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3P0G2_GASACCoiled-coil domain containing 97. (291 aa)    
Predicted Functional Partners:
G3NLZ7_GASAC
Splicing factor 3b, subunit 6.
    
 
 0.936
G3P7W6_GASAC
Splicing factor 3B subunit 5; Belongs to the SF3B5 family.
    
 
 0.927
G3P253_GASAC
Splicing factor 3b, subunit 1.
    
 
 0.897
G3NDR5_GASAC
Splicing factor 3b, subunit 3.
    
 
 0.885
G3PDS4_GASAC
Splicing factor 3a, subunit 1.
   
 
 0.736
G3NI77_GASAC
Splicing factor 3b, subunit 4.
    
 
 0.714
G3PR91_GASAC
Splicing factor 3a, subunit 2.
   
 
 0.681
G3NYT4_GASAC
Splicing factor 3a, subunit 3.
   
 
 0.677
G3PTT6_GASAC
Tetratricopeptide repeat domain 33.
    
   0.637
G3NBG9_GASAC
Calcium homeostasis endoplasmic reticulum protein.
   
 
 0.630
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.