STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3P0H2_GASACUncharacterized protein. (230 aa)    
Predicted Functional Partners:
AGBL4
ATP/GTP binding protein like 4.
    
 
 0.590
G3NXR8_GASAC
ATP/GTP binding protein 1.
   
 
 0.492
G3NBD9_GASAC
ATP/GTP binding protein-like 1.
    
 
 0.491
G3PA60_GASAC
ATP/GTP binding protein-like 2.
    
 
 0.478
G3Q6M2_GASAC
Tubulin tyrosine ligase-like family, member 12.
      
 0.440
G3NXJ4_GASAC
Tubulin tyrosine ligase-like family, member 5.
 
    
 0.429
G3NPS0_GASAC
ATP/GTP binding protein-like 5.
    
 
 0.411
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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