STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3P0L7_GASACIntraflagellar transport 140 homolog (Chlamydomonas). (1373 aa)    
Predicted Functional Partners:
G3NF16_GASAC
Uncharacterized protein.
   
 0.998
G3PUL6_GASAC
WD repeat domain 19.
    
 0.998
G3PHR0_GASAC
WD repeat-containing protein 35.
   
 0.996
G3NPC7_GASAC
Tetratricopeptide repeat domain 21B.
  
 0.989
IFT43
Intraflagellar transport 43.
    
 0.989
G3P714_GASAC
Uncharacterized protein.
   
 0.939
G3NNW4_GASAC
Intraflagellar transport 20 homolog (Chlamydomonas).
    
 0.895
G3NRM4_GASAC
Intraflagellar transport 172.
   
 0.886
G3PJH0_GASAC
Intraflagellar transport 81 homolog.
    
 0.886
EML4
EMAP like 4.
    
 0.874
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.