STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3P1C5_GASACCoiled-coil domain containing 12. (163 aa)    
Predicted Functional Partners:
G3PCH6_GASAC
Cell division cycle 40 homolog (S. cerevisiae).
    
  0.999
G3Q1K0_GASAC
Pre-mRNA processing factor 19.
    
   0.984
TCERG1
Transcription elongation regulator 1.
    
  0.975
G3NWI0_GASAC
SYF2 pre-mRNA-splicing factor.
    
  0.973
G3PDD4_GASAC
CDC5 cell division cycle 5-like (S. pombe).
    
   0.971
WDR25
WD repeat domain 25.
    
  0.969
G3PLS2_GASAC
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.965
G3N9G4_GASAC
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.961
G3P3L5_GASAC
Elongation factor Tu GTP binding domain containing 2.
    
   0.961
G3PDK1_GASAC
Crooked neck pre-mRNA splicing factor 1.
    
   0.958
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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