STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3P1F6_GASACUncharacterized protein. (138 aa)    
Predicted Functional Partners:
G3PBC3_GASAC
Intersectin 2a.
   
 0.896
G3PUV9_GASAC
Intersectin 2b.
   
 0.896
G3PBG4_GASAC
Intersectin 1 (SH3 domain protein).
    
 0.835
G3PF33_GASAC
WASP actin nucleation promoting factor a.
   
 0.761
G3Q4T1_GASAC
WASP like actin nucleation promoting factor b.
   
 0.748
G3NCA0_GASAC
Uncharacterized protein.
   
 0.708
G3PNC3_GASAC
Growth arrest-specific 7a.
    
 0.699
G3NA54_GASAC
Rac family small GTPase 2.
   
 0.673
G3NGH6_GASAC
tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]
    
   0.661
G3QCL4_GASAC
Ras homolog family member Gb.
   
 0.654
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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